miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|25156007|gb|CA600845.1|CA600845 GTTGAAGTTCCATCTATTAATGGATAAGGTTTTTCTGCTAACATATAAGAATTTTTGAAGAAAGAAAAGACAGAAATACC
CAATATCTTGCTAGAACAAGATATTGGGTATTTCTGTCTTTATTTTGAATCTTTTTTTTCTTCTTAATCTTTCTATTCAG
AATTCAGTTAACGACGAGATTTAGTATCCTTTCTTGCATTTTCATAACTCGTGAAATGCCGAGTAGGCACGAATTCCCCC
AATTTGCGACCTACCATAGGATTTGTTATGTAAATAGGTATATGTTCCTTTCCATTATGAATCGCGATTGTATGGCCAAC
CATTGTGGGTAGAATGCTAGATGCCCGGGACCACGTTACTATTGTTTCTTTCTCCTCCTTCATATTGACCTTTTCTATCT
TTGCCAATAAATGATGAGCTACAAAAGGATTCGTTTTTTTTCGTGTCACAGCTGATTACTCCTTTTTTCCTTTTTAAAGA
GTGGCATTCTATGTCCAATATCTCGATCGAAGTACGGAGGTCAGAATAAATAGAATAATGATCATGGAAAAAAGAAAAAA
ATC




Most similar to sp|P60577|RR19_WHEAT

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P60577|RR19_WHEAT 30S ribosomal protein S19, chloroplastic
           OS=Triticum aestivum GN=rps19-A PE=3 SV=2
          Length = 93

 Score =  191 bits (484), Expect = 3e-48
 Identities = 92/93 (98%), Positives = 93/93 (100%)
 Frame = -1

Query: 449 VTRKKTNPFVAHHLLAKIEKVNMKEEKETIVTWSRASSILPTMVGHTIAIHNGKEHIPIY 270
           +TRKKTNPFVAHHLLAKIEKVNMKEEKETIVTWSRASSILPTMVGHTIAIHNGKEHIPIY
Sbjct: 1   MTRKKTNPFVAHHLLAKIEKVNMKEEKETIVTWSRASSILPTMVGHTIAIHNGKEHIPIY 60

Query: 269 ITNPMVGRKLGEFVPTRHFTSYENARKDTKSRR 171
           ITNPMVGRKLGEFVPTRHFTSYENARKDTKSRR
Sbjct: 61  ITNPMVGRKLGEFVPTRHFTSYENARKDTKSRR 93